Trans-meQTLs across different cancer types

In trans-meQTL analyses, we identified 965,050 trans-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

     

e.g., "BLCA"
e.g., "rs4975682"
e.g., "cg25599786"
e.g., "PDCD6"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
p-valule
Display
BLCA rs4388880 chr11:50330285 G/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.59 -0.78 1.4E-80 Box Plot
BLCA rs4521174 chr3:125766786 A/T cg26321609 chr3:123680480 CCDC14 -1.11 -24.39 -0.78 9.19E-80 Box Plot
BLCA rs4552306 chr3:125754867 T/C cg26321609 chr3:123680480 CCDC14 -1.11 -24.17 -0.78 7.81E-79 Box Plot
BLCA rs4560250 chr3:125756918 T/C cg26321609 chr3:123680480 CCDC14 -1.11 -24.17 -0.78 7.81E-79 Box Plot
BLCA rs4568997 chr11:50336514 C/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.66 -0.78 7.53E-81 Box Plot
BLCA rs4614442 chr11:50331039 C/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.17 -0.78 7.62E-79 Box Plot
BLCA rs4783662 chr16:68719649 A/G cg04657470 chr2:198365150 HSPE1;HSPD1 1.1 26.35 0.8 8.94E-88 Box Plot
BLCA rs4783663 chr16:68720271 T/C cg04657470 chr2:198365150 HSPE1;HSPD1 1.1 25.52 0.79 2.14E-84 Box Plot
BLCA rs4783666 chr16:68720588 G/A cg04657470 chr2:198365150 HSPE1;HSPD1 1.08 25.14 0.79 8.06E-83 Box Plot
BLCA rs4881629 chr11:50281443 A/G cg15704280 chr7:45808275 SEPT13 -1.03 -24.16 -0.78 8.75E-79 Box Plot
BLCA rs4881674 chr11:50294937 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.64 -0.78 8.52E-81 Box Plot
BLCA rs4881675 chr11:50294795 G/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.64 -0.78 8.52E-81 Box Plot
BLCA rs4881684 chr11:50271166 T/A cg15704280 chr7:45808275 SEPT13 -1.02 -24.42 -0.78 6.89E-80 Box Plot
BLCA rs4881685 chr11:50269679 G/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.73 -0.79 3.85E-81 Box Plot
BLCA rs4881686 chr11:50268957 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.15 -0.78 9.67E-79 Box Plot